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In most cases, the hearing cheap generic seroquel loss is mild and will go away quickly http://vicstyles.com/seroquel-discount-card/. However, persistent or severe hearing loss that develops suddenly should always be investigated by a physician. Here are the most common causes of temporary hearing loss and the standard treatments for each:Four common causes of temporary hearing loss 1. Middle ear s Ear s can cause temporary hearing lossin children cheap generic seroquel and adults. When the area behind the eardrum is invaded by bacteria-filled fluid, an is very likely to develop.

Because the middle ear contains a passageway to the back of the throat, ear s can develop from a nasty cold or seroquel. These s are cheap generic seroquel common in children and could affect their ability to hear temporarily. They usually only affect one ear. An in the middle ear can cause a build-up of fluids when the body is trying to fight the . These fluids can put pressure on the structures of the ear that are used in hearing, such as the cheap generic seroquel middle ear bones.

In some cases, these fluids cause so much pressure that the eardrum can rupture and leak blood and pus-like fluids from the ear. A ruptured ear drum can be painful, but it can often repair itself once the has cleared. Treating middle ear cheap generic seroquel s Treatment for ear s is typically a course of antibiotics. If you are prescribed antibiotics for an ear , don't stop taking them just because you feel better. Continue taking the medication until it is gone to ensure you've wiped out the completely.

2. Exposure to loud noise Extremely loud noises—like the kind found at the front-row of a concert, or at the shooting range (with no ear protection)—can cause temporary hearing loss. How does this happen?. Deep inside our inner ears, tiny hair cells detect sound waves and transmit these signals to the brain. These hair cells can be damaged by noise.

It usually affects both ears, but can be more severe on the side that received more noise (such as from a gunblast while you held a gun, known as "shooter's ear"). It doesn't generally cause pain. When the hearing loss is permanent, this is known as noise-induced hearing loss. Treating loud noise exposure or 'concert deafness' Concert deafness is a bad sign—your ears have been damaged. If this sounds like what has happened to you, rest your ears as soon as you can.

Do not expose yourself to more loud sounds if at all possible. While your hearing will likely recover in the short-term, you may have caused some long-term damage to the delicate hair cells in your ears. If your hearing doesn't get better within a day or so, seek medical help. And don't forget that the next time you find yourself in a loud setting, you must protect your hearing from further damage by wearing ear protection. If you know you’ll be attending a loud concert or fireworks display, wear earplugs or earmuffs.

If your hobbies include using loud equipment such as live music, motorcycles, snowmobiles or firearms, always wear protective hearing gear. Muffled hearing and ringing in the ears, often called tinnitus, also generally results from high noise exposure. Turn down the volume or wear protective ear equipment to reduce the chance of developing permanent hearing loss and lifelong tinnitus. 3. Accumulation of earwax Believe it or not, earwax is a good thing–most of the time.

Its job is to trap dust and other small particles before they reach the eardrum. As a general rule, earwax falls out of your ear canal naturally, but there are times when the wax becomes impacted or stuck in the ear canal. This blockage can cause sudden loss of hearing in one or both ears, hindering the ability of sound waves to travel through the ear canal to the ear drum. When the eardrum is unable to function properly, hearing can be negatively affected. It can affect one or both ears and doesn't generally cause pain.

Treating impacted earwax Visit a healthcare provider who can easily flush or remove the wax from the ear canal. For many people, the procedure is quick and fairly painless. Whatever you do, do not insert a cotton swab in your ear. 4. Swimmer's ear Wearing earplugs while swimming canreduce the chance of swimmer's ear.

If you’ve recently been swimming and are experiencing itchy ears, pain or a feeling of fullness in your ears, you may have a case of swimmer’s ear, known as an outer ear . This in your outer ear canal usually occurs when water remains in your ear after you’ve been swimming. It can affect one or both ears and be incredibly painful. Did you scratch your ears and now can't hear?. Despite the name, swimmer's ear also can be caused by scratches or abrasions in your ear canal caused by using cotton swabs, hairpins or your finger to clean your ear canal.

Treating swimmer's ear Antibiotic drops are usually prescribed. When this condition is properly treated by a medical professional, your hearing typically returns to normal. Also, prevent future problems by making sure you always get rid of water trapped in your ears. 5. Medication side effects Some drugs, including aspirin, are linked to hearing loss and tinnitus, usually in both ears.

This is known as ototoxicity. If you develop any new changes in hearing after starting a medication, always let your doctor know. Treatment may include switching medications. Most of the time this type of hearing loss is temporary, but in some cases—especially when an alternative medication isn't available for a life-threatening condition—the loss may be permanent. Temporary hearing loss in children Many of the same things can cause temporary hearing loss in children.

However, especially for younger kids and babies, the signs and symptoms can be a little different. Read more about temporary hearing loss in kids. Don't ignore sudden hearing loss in one ear Can't suddenly hear out of your left or right ear?. Sudden hearing loss without a clear origin (you didn't recently attend a loud concert or swim in a dirty lake, for example) is a medical emergency and should be treated promptly. Trust your gut.

If something doesn't "sound" right or feels funny beyond a normal stuffed-up head, get to the doctor. The faster you get treatment, the better chance you have to regain your hearing. If you've been sick lately, this is important to tell your doctor, too—viral s, including mumps and even antidepressant drugs, have been linked to sudden hearing loss and tinnitus. Sudden hearing loss without a clear origin (you didn't recently attend a loud concert or swim in a lake, for example) is a medical emergency and should be treated promptly. Some conditions may require advanced testing, so after seeing a hearing care provider or doctor you may need to schedule a follow-up appointment or visit a specialized physician known as an otolaryngologist (ENT).

What about clogged ears?. If you still have your hearing, but everything sounds mildly "muffled" or clogged, you may be wondering if it's one ot the causes above. It might be, but other things can cause clogged ears, too. Learn more about why your ears feel clogged or muffled.There is no denying that exercise is beneficial to the body and mind. But if a bustling gym is your favorite place to work out, be careful — heavy exertion paired with loud music can lead to hearing loss or tinnitus.

While it's an unusual cause of hearing loss, it's also not unheard of.Weightlifting and hearing damage Holding your breath and straining whilelifting weights can damage your inner ears.Loud music and the sounds of slammingweights increase your risk. Why do my ears get clogged or plugged up when I exercise?. Heavy exertion, such as straining while lifting weights, causes intracranial pressure (pressure within the brain), which in turn leads to pressure within the ears. If you also hold your breath while lifting, you add even more pressure in the inner ear. This is not unlike the pressure change you experience on an airplane.

How to prevent it. Clear your ears beforehand (by yawning, etc). Don't lift too heavy and never hold your breath. If you're working out with a cold, you may want to take a decongestant, as well. Got ringing in the ears after exercise?.

The increased pressure in the inner ear during or after intense exercise can lead to a perilymphatic fistula (PLF), which occurs unexpectedly and most people aren’t aware of right away. Simply put, a PLF is a small tear or defect in the thin membrane between the inner ear and the middle ear. The tear itself can be caused by the pressure in the inner ear due to straining. Hearing changes occur when the strain of subsequent workouts causes fluid from the inner ear to leak through the tear and into the middle ear. Symptoms include tinnitus, ear fullness, dizziness and sometimes sensitivity to normal noises.

Smashing of weights akin to 'shotgun blast' Weight rooms are noisy places, particularly if weightlifters aren't mindful about careful stacking of weights. €œI never actually took a sound level meter to the smashing of weights in a weight room, but it is likely that even short durations of loud intense weights dropping, can have the same potential damage to hearing as a shotgun blast or an airbag deploying,” said Rachel Raphael, M.A., CCC-A, an audiologist with Mercy Medical Center in Baltimore and a certified group fitness instructor. If you're lifting weights and someone suddenly drops heavy weights right by your ear, you risk permanent hearing loss and the onset of tinnitus. Gyms can help by providing padded flooring, and asking members to follow rules about proper ways to use weights. Loud music is an added burden on ears To get athletes motivated for intense workouts, gyms often crank up the tunes to an ear-splitting level, sometimes well over 90-100 decibels (dB).

When you combine loud music with noise coming from stationary bikes, elliptical trainers and treadmills or the crashing of heavy weights, you have the perfect recipe for irreversible noise-induced hearing loss or tinnitus. How do you know if the music is too loud?. A good clue is if you leave your Zumba class or gym workout with ringing ears and muffled hearing, which means you have likely damaged the delicate hair cells in your inner ear. You can also download a smartphone app to measure noise levels in real time. It also helps to how loud is too loud.

While your hearing may recover in the short-term, over time your ears are less likely to heal, predisposing you to hearing loss. Although articles indicate that some trainers and gyms have little appetite for turning down the music, it doesn't hurt to ask. Sometimes, just a polite request can spark awareness that will benefit everyone in the gym. If that fails, bring along a set of earplugs. You'll still be able to hear your favorite tunes and the instructions of the trainer but at a safer volume.

Lowering the volume won't affect your workout, study shows You can even point your fitness instructor to the results of an interesting study on noise levels in gyms. It showed turning down the volume won't affect the quality of your workout, as explained in depth by this article. "Sound levels in many fitness classes remain dangerously high," the study authors state. "However, music level can be lowered without a significant impact on perceived exercise intensity and many participants prefer lower sound levels than current levels." Dos and don'ts for healthy hearing during exercise No matter what form of exercise you choose, here are some dos and don’ts to ensure you are taking care of your hearing while working out. Do get a hearing check immediately if you experience any change in hearing during or after exercise.

Do reduce the weight you're lifting to reduce strain. Reducing the strain could possibly prevent a PLF from occurring. Do protect your hearing in the gym. Wear earplugs to safeguard against loud music or keep headphones at a reasonable volume to avoid noise-induced hearing loss. Don’t hold your breath to get that extra boost of strength, as holding your breath increases the pressure within the ears.

Don’t strain during weight lifting. Don’t participate in sports which can result in blows to the head, such as boxing or wrestling, if you are experiencing changes in your hearing. Don’t bang or drop the weights when lifting. That sudden noise can reach a level as high as 140 decibels, which is like being exposed to a gunshot or explosion. Don’t ignore symptoms of hearing loss.

When to seek help Don't shy away from efforts to get fit and healthy, just be aware of the dangers to your hearing health at the same time.

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The International Journal of Tuberculosis and Lung Disease (IJTLD) is for clinical research and epidemiological studies on lung health, including articles on TB, TB-HIV and respiratory diseases such as antidepressant drugs, cheap generic seroquel asthma, COPD, child lung health and the hazards of tobacco and air pollution. Individuals and institutes can subscribe to the IJTLD online or in print – simply email us at [email protected] for details.The IJTLD is dedicated to understanding lung disease and to the dissemination of knowledge leading to better lung health. To allow us to share scientific research as rapidly as possible, the IJTLD is fast-tracking the publication of certain articles as preprints prior to their publication.

Read fast-track articles.No AbstractNo Reference information available - sign in cheap generic seroquel for access. No Supplementary Data.No Article MediaNo MetricsDocument Type. EditorialAffiliations:1.

Burnet Institute, Melbourne, VIC, Australia 2 cheap generic seroquel. Dahdaleh Institute of Global Health Research, York University, Toronto, ON, Canada, Centre for the AIDS Programme of Research in South Africa (CAPRISA), University of KwaZulu-Natal, Durban, South Africa 3. School of Public Health, University of Sydney, Sydney, NSW, Australia, Department of Global Health and Development, London School of Hygiene &.

Tropical Medicine, London, UK 4. Survivors Against TB, Mumbai, India 5. Victorian Tuberculosis Program, Melbourne Health, Melbourne, VIC, Australia, Department of Microbiology and Immunology, University of Melbourne, Melbourne, VIC, Australia 6.

Department of Global Health and Social Medicine, Harvard Medical School, Boston, MA, USA 7.

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InterSystems earlier this week unveiled its new IRIS FHIR Accelerator Service.WHY IT MATTERSAs developers work on HL7 FHIR applications for different healthcare use cases, they need Who can buy kamagra a way seroquel attorneys to manage the data that fuel them. InterSystems designed this new service as a fully managed, enterprise-grade server – providing developers a secure and scalable repository for storing and sharing.The goal of the technology, built on InterSystems IRIS data platform, is to simplify data storage across IoMT, electronic health records and research databases, according to Scott Gnau, head of data platforms for InterSystems.Key features include authorization and authentication pre-built with OpenID seroquel attorneys Connect and OAuth 2.0 using the Cognito authorization server, which includes intuitive methods to select custom FHIR scopes and allows developers to easily configure access control for users and applications.Others include API keys that authenticate incoming FHIR requests, a developer interface to help with more efficient testing, and support for the latest HL7 FHIR version R4, including the United States Core Data for Interoperability, or USCDI.In addition to high availability using mirroring, and continuous updates delivered automatically, the IRIS FHIR Accelerator Services supports batch import of FHIR bundles via secure file transfer protocol, or sFTP, making it easy to get started quickly with app development.THE LARGER TRENDThis is the newest offering from InterSystems' Smart Data Services, designed to help customers access the company's database, interoperability and analytics technologies as smaller, flexible, cloud centric, managed services. Another recent example is HealthShare Message Transformation Services for Amazon HealthLake, which was introduced earlier this summer.ON THE RECORD"With a solution like InterSystems IRIS FHIR Accelerator Service, developers have seroquel attorneys the technology they need to harness interoperability and create solutions to reduce costs, improve patient engagement, facilitate better outcomes, and empower their innovation initiatives," said Don Woodlock, head of healthcare solutions for InterSystems, in a statement."With a fully-managed offering like InterSystems IRIS FHIR Accelerator Service, developers don't have to worry about traditional infrastructure concerns that come with a FHIR server, including backup and restore, maintenance, and high availability," added Gnau. Twitter. @MikeMiliardHITNEmail the writer.

Mike.miliard@himssmedia.comHealthcare IT News is a HIMSS publication.Three major healthcare informatics organizations this week published a new study designed to help guide the conversation around how electronic health information should be managed and put to use by healthcare providers and technology developers.WHY IT MATTERSThe American Health Information Management Association, the American Medical Informatics Association and the HIMSS Electronic Health Record Association on Monday put out a report, Defining EHI and the Designated Record Set in an Electronic World (PDF), which focuses on issues around operationalization of the definitions of electronic health information and designated record set.Such an effort is key to success for the 21st Century Cures Act Final Rule, whose requirements around information blocking and health IT certification rely on the definition of EHI – itself grounded in the definition of the designated record set as defined by HIPAA."How these definitions will be operationalized by clinicians and developers are critical to successful compliance with the Cures Act Final Rule," said the groups in unveiling the new report, which sees several challenges for healthcare stakeholders must grapple with."Our analysis demonstrates the complexity associated with defining EHI for multipurpose use, such as in ONC’s certification program and compliance with information blocking," said AHIMA, AMIA and EHRA in the new report."Whether a data class is considered EHI may depend on certain status conditions or characteristics. Other data classes might merit special consideration, such as behavioral health information. Throughout this process, Task Force members have agreed that what data classes are considered EHI will continue to evolve over time. However, we firmly believe that standardizing clinician and developer expectations around the definition of EHI will be critically important to successful operationalization of the Cures Act Final Rule."Read the full report in more detail here.WHY IT MATTERSIn 2020, the three groups first launched a task force to put together recommendations for a consensus-based approach to operationalizing the definition of EHI.Setting clear expectations around what EHI is and isn't, they said, will help providers, certified IT developers, HIEs and networks better complying with the Cures Act Final Rule, which has some key compliance dates looming:Healthcare organizations will be expected to adhere to the full scope of EHI for purposes of compliance with Cures Act info blocking provisions starting October 6, 2022.Certification to the EHI export criterion – the process of electronic health records exporting EHI they're storing – is expected by December 31, 2023.The task force is seeking feedback on these findings in the new report ahead of those dates. Its work will continue in the months ahead, including "further exploration of whether common characteristics across covered entities could yield a common interpretation of the designated record set that can serve as a template to improve consistency."ON THE RECORD"This preliminary report is a call to action for healthcare leaders to come together and advance a consensus-based approach to operationalizing the definition of EHI," said Lauren Riplinger, AHIMA's vice president of policy and government affairs, in a statement."It was clear from the outset that the fluid nature of the scope of EHI presents us a unique informatics challenge," said Dr.

Joseph Kannry, chair of AMIA's Public Policy Committee. "We look forward to working further with our cross-stakeholder partners to try to ensure that we're ready to meet these challenges head-on so our patients will ultimately benefit." Twitter. @MikeMiliardHITNEmail the writer. Mike.miliard@himssmedia.comHealthcare IT News is a HIMSS publication.Providence health system this week announced the launch of its new Providence National Foundation, which aims to drive philanthropy for technology-driven innovation and clinical research toward whole person care, health equity and more.WHY IT MATTERSProvidence National Foundation will work with local organizations across the seven states covered by the health system. Alaska, California, Montana, New Mexico, Oregon, Texas and Washington."Philanthropy powers the programs and services that provide access to the latest technology, equipment, facilities and research, so caregivers can deliver the same high-quality health outcomes in every community we serve, from rural areas to large cities," Dr.

Rod Hochman, president and CEO of Providence, said in a statement.Providence's 40 local foundations have already raised nearly $1 billion over the past three years. With this new national foundation, the health system wants to build on that momentum, enabling new funding opportunities toward six overarching goals:Whole person care, with an emphasis on building new models for personalized treatments that address mind, body and spirit.Innovation to advance technology and data-driven research – "from telehealth to genome sequencing, data mapping to scientific investigation."Clinical institutes. With access to centers of excellence, Providence wants its centers across seven states to have access to research, data, best-practice findings and reports.Vulnerable communities. "Providence is committed to the total wellness of the community and considers social determinants of health, housing, and treatment of mental health and substance abuse as integral to creating the highest level of health for all people," officials said.Health equity. The health system says it wants to eliminate disparities in healthcare, providing "people of all backgrounds, cultures and identities" the best, most comprehensive care possible.Environmental stewardship.

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Mike.miliard@himssmedia.comHealthcare IT News is a HIMSS publication..

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Twitter. @MikeMiliardHITNEmail the writer. Mike.miliard@himssmedia.comHealthcare IT News is a HIMSS publication.Three major healthcare informatics organizations this week published a new study designed to help guide the conversation around how electronic health information should be managed and put to use by healthcare providers and technology developers.WHY IT MATTERSThe American Health Information Management Association, the American Medical Informatics Association and the HIMSS Electronic Health Record Association on Monday put out a report, Defining EHI and the Designated Record Set in an Electronic World (PDF), which focuses on issues around operationalization of the definitions of electronic health information and designated record set.Such an effort is key to success for the 21st Century Cures Act Final Rule, whose requirements around information blocking and health IT certification rely on the definition of EHI – itself grounded in the definition of the designated record set as defined by HIPAA."How these definitions will be operationalized by clinicians and developers are critical to successful compliance with the Cures Act Final Rule," said the groups in unveiling the new report, which sees several challenges for healthcare stakeholders must grapple with."Our analysis demonstrates the complexity associated with defining EHI for multipurpose use, such as in ONC’s certification program and compliance with information blocking," said AHIMA, AMIA and EHRA in the new report."Whether a data class is considered EHI may depend on certain status conditions or characteristics.

Other data classes might merit special consideration, such as behavioral health information. Throughout this process, Task Force members have agreed that what data classes are considered EHI will continue to evolve over time. However, we firmly believe that standardizing clinician and developer expectations around the definition of EHI will be critically important to successful operationalization of the Cures Act Final Rule."Read the full report in more detail here.WHY IT MATTERSIn 2020, the three groups first launched a task force to put together recommendations for a consensus-based approach to operationalizing the definition of EHI.Setting clear expectations around what EHI is and isn't, they said, will help providers, certified IT developers, HIEs and networks better complying with the Cures Act Final Rule, which has some key compliance dates looming:Healthcare organizations will be expected to adhere to the full scope of EHI for purposes of compliance with Cures Act info blocking provisions starting October 6, 2022.Certification to the EHI export criterion – the process of electronic health records exporting EHI they're storing – is expected by December 31, 2023.The task force is seeking feedback on these findings in the new report ahead of those dates.

Its work will continue in the months ahead, including "further exploration of whether common characteristics across covered entities could yield a common interpretation of the designated record set that can serve as a template to improve consistency."ON THE RECORD"This preliminary report is a call to action for healthcare leaders to come together and advance a consensus-based approach to operationalizing the definition of EHI," said Lauren Riplinger, AHIMA's vice president of policy and government affairs, in a statement."It was clear from the outset that the fluid nature of the scope of EHI presents us a unique informatics challenge," said Dr. Joseph Kannry, chair of AMIA's Public Policy Committee. "We look forward to working further with our cross-stakeholder partners to try to ensure that we're ready to meet these challenges head-on so our patients will ultimately benefit." Twitter.

@MikeMiliardHITNEmail the writer. Mike.miliard@himssmedia.comHealthcare IT News is a HIMSS publication.Providence health system this week announced the launch of its new Providence National Foundation, which aims to drive philanthropy for technology-driven innovation and clinical research toward whole person care, health equity and more.WHY IT MATTERSProvidence National Foundation will work with local organizations across the seven states covered by the health system. Alaska, California, Montana, New Mexico, Oregon, Texas and Washington."Philanthropy powers the programs and services that provide access to the latest technology, equipment, facilities and research, so caregivers can deliver the same high-quality health outcomes in every community we serve, from rural areas to large cities," Dr.

Rod Hochman, president and CEO of Providence, said in a statement.Providence's 40 local foundations have already raised nearly $1 billion over the past three years. With this new national foundation, the health system wants to build on that momentum, enabling new funding opportunities toward six overarching goals:Whole person care, with an emphasis on building new models for personalized treatments that address mind, body and spirit.Innovation to advance technology and data-driven research – "from telehealth to genome sequencing, data mapping to scientific investigation."Clinical institutes. With access to centers of excellence, Providence wants its centers across seven states to have access to research, data, best-practice findings and reports.Vulnerable communities.

"Providence is committed to the total wellness of the community and considers social determinants of health, housing, and treatment of mental health and substance abuse as integral to creating the highest level of health for all people," officials said.Health equity. The health system says it wants to eliminate disparities in healthcare, providing "people of all backgrounds, cultures and identities" the best, most comprehensive care possible.Environmental stewardship. "Providence will work tirelessly to become carbon-negative by 2030 by championing environmental stewardship for a healthier planet," according to the health system.THE LARGER TRENDProvidence has continued to move the needle on technology-driven innovation during the antidepressant drugs public health emergency.

In July, Healthcare IT News showed how the health system has Providence St. Joseph Health bolstered its telehealth program with $1.9 million in FCC funding, scaling up volume and boosting patient experience.Earlier during the seroquel, Providence IT leaders described how the health system has tailored its security strategies and consumer-facing communication tools to meet new care delivery and patient engagement imperatives.ON THE RECORD"Our goal is to help solve some of our nation's most complex and systemic health issues to improve the health of everyone in our communities and beyond, especially those who are most vulnerable," said Hochman of the new Providence National Foundation."Providence found philanthropic support to be especially important throughout the antidepressant drugs seroquel, during which donations were used to support Providence's research teams as they provided real-time analysis of health trends related to the seroquel," he added."Our generous donors and supporters make Providence's lifesaving breakthrough treatments possible for patients today, and pave the way for future impact and a healthier world," added Laurie Kelley, chief philanthropy officer at Providence. Twitter.

@MikeMiliardHITNEmail the writer. Mike.miliard@himssmedia.comHealthcare IT News is a HIMSS publication..

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AbstractIntroduction where can i buy seroquel over the counter seroquel date rape. We report a very rare case of familial breast cancer and diffuse gastric cancer, with germline pathogenic variants in both BRCA1 and CDH1 genes. To the best of our knowledge, this is the first report of seroquel date rape such an association.Family description. The proband is a woman diagnosed with breast cancer at the age of 52 years. She requested genetic counselling in 2012, at the age seroquel date rape of 91 years, because of a history of breast cancer in her daughter, her sister, her niece and her paternal grandmother and was therefore concerned about her relatives.

Her sister and maternal aunt also had gastric cancer. She was tested for several genes associated seroquel date rape with hereditary breast cancer.Results. A large deletion of BRCA1 from exons 1 to 7 and two CDH1 pathogenic cis variants were identified.Conclusion. This complex situation is challenging for genetic counselling and management of seroquel date rape at-risk individuals.cancer. Breastcancer.

Gastricclinical geneticsgenetic screening/counsellingmolecular geneticsIntroductionGLI-Kruppel family member 3 (GLI3) encodes for a zinc finger transcription factor which plays a key role in the sonic hedgehog (SHH) signalling pathway essential in both limb and craniofacial development.1 2 In hand development, SHH seroquel date rape is expressed in the zone of polarising activity (ZPA) on the posterior side of the handplate. The ZPA expresses SHH, creating a gradient of SHH from the posterior to the anterior side of the handplate. In the presence of SHH, seroquel date rape full length GLI3-protein is produced (GLI3A), whereas absence of SHH causes cleavage of GLI3 into its repressor form (GLI3R).3 4 Abnormal expression of this SHH/GLI3R gradient can cause both preaxial and postaxial polydactyly.2Concordantly, pathogenic DNA variants in the GLI3 gene are known to cause multiple syndromes with craniofacial and limb involvement, such as. Acrocallosal syndrome5 (OMIM. 200990), Greig cephalopolysyndactyly syndrome6 seroquel date rape (OMIM.

175700) and Pallister-Hall syndrome7 (OMIM. 146510). Also, in non-syndromic polydactyly, such as preaxial polydactyly-type 4 (PPD4, OMIM. 174700),8 pathogenic variants in GLI3 have been described. Out of these diseases, Pallister-Hall syndrome is the most distinct entity, defined by the presence of central polydactyly and hypothalamic hamartoma.9 The other GLI3 syndromes are defined by the presence of preaxial and/or postaxial polydactyly of the hand and feet with or without syndactyly (Greig syndrome, PPD4).

Also, various mild craniofacial features such as hypertelorism and macrocephaly can occur. Pallister-Hall syndrome is caused by truncating variants in the middle third of the GLI3 gene.10–12 The truncation of GLI3 causes an overexpression of GLI3R, which is believed to be the key difference between Pallister-Hall and the GLI3-mediated polydactyly syndromes.9 11 Although multiple attempts have been made, the clinical and genetic distinction between the GLI3-mediated polydactyly syndromes is less evident. This has for example led to the introduction of subGreig and the formulation of an Oro-facial-digital overlap syndrome.10 Other authors, suggested that we should not regard these diseases as separate entities, but as a spectrum of GLI3-mediated polydactyly syndromes.13Although phenotype/genotype correlation of the different syndromes has been cumbersome, clinical and animal studies do provide evidence that distinct regions within the gene, could be related to the individual anomalies contributing to these syndromes. First, case studies show isolated preaxial polydactyly is caused by both truncating and non-truncating variants throughout the GLI3 gene, whereas in isolated postaxial polydactyly cases truncating variants at the C-terminal side of the gene are observed.12 14 These results suggest two different groups of variants for preaxial and postaxial polydactyly. Second, recent animal studies suggest that posterior malformations in GLI3-mediated polydactyly syndromes are likely related to a dosage effect of GLI3R rather than due to the influence of an altered GLI3A expression.15Past attempts for phenotype/genotype correlation in GLI3-mediated polydactyly syndromes have directly related the diagnosed syndrome to the observed genotype.10–12 16 Focusing on individual hand phenotypes, such as preaxial and postaxial polydactyly and syndactyly might be more reliable because it prevents misclassification due to inconsistent use of syndrome definition.

Subsequently, latent class analysis (LCA) provides the possibility to relate a group of observed variables to a set of latent, or unmeasured, parameters and thereby identifying different subgroups in the obtained dataset.17 As a result, LCA allows us to group different phenotypes within the GLI3-mediated polydactyly syndromes and relate the most important predictors of the grouped phenotypes to the observed GLI3 variants.The aim of our study was to further investigate the correlation of the individual phenotypes to the genotypes observed in GLI3-mediated polydactyly syndromes, using LCA. Cases were obtained by both literature review and the inclusion of local clinical cases. Subsequently, we identified two subclasses of limb anomalies that relate to the underlying GLI3 variant. We provide evidence for two different phenotypic and genotypic groups with predominantly preaxial and postaxial hand and feet anomalies, and we specify those cases with a higher risk for corpus callosum anomalies.MethodsLiterature reviewThe Human Gene Mutation Database (HGMD Professional 2019) was reviewed to identify known pathogenic variants in GLI3 and corresponding phenotypes.18 All references were obtained and cases were included when they were diagnosed with either Greig or subGreig syndrome or PPD4.10–12 Pallister-Hall syndrome and acrocallosal syndrome were excluded because both are regarded distinct syndromes and rather defined by the presence of the non-hand anomalies, than the presence of preaxial or postaxial polydactyly.13 19 Isolated preaxial or postaxial polydactyly were excluded for two reasons. The phenotype/genotype correlations are better understood and both anomalies can occur sporadically which could introduce falsely assumed pathogenic GLI3 variants in the analysis.

Additionally, cases were excluded when case-specific phenotypic or genotypic information was not reported or if these two could not be related to each other. Families with a combined phenotypic description, not reducible to individual family members, were included as one case in the analysis.Clinical casesThe Sophia Children’s Hospital Database was reviewed for cases with a GLI3 variant. Within this population, the same inclusion criteria for the phenotype were valid. Relatives of the index patients were also contacted for participation in this study, when they showed comparable hand, foot, or craniofacial malformations or when a GLI3 variant was identified. Phenotypes of the hand, foot and craniofacial anomalies of the patients treated in the Sophia Children's Hospital were collected using patient documentation.

Family members were identified and if possible, clinically verified. Alternatively, family members were contacted to verify their phenotypes. If no verification was possible, cases were excluded.PhenotypesThe phenotypes of both literature cases and local cases were extracted in a similar fashion. The most frequently reported limb and craniofacial phenotypes were dichotomised. The dichotomised hand and foot phenotypes were preaxial polydactyly, postaxial polydactyly and syndactyly.

Broad halluces or thumbs were commonly reported by authors and were dichotomised as a presentation of preaxial polydactyly. The extracted dichotomised craniofacial phenotypes were hypertelorism, macrocephaly and corpus callosum agenesis. All other phenotypes were registered, but not dichotomised.Pathogenic GLI3 variantsAll GLI3 variants were extracted and checked using Alamut Visual V.2.14. If indicated, variants were renamed according to standard Human Genome Variation Society nomenclature.20 Variants were grouped in either missense, frameshift, nonsense or splice site variants. In the group of frameshift variants, a subgroup with possible splice site effect were identified for subgroup analysis when indicated.

Similarly, nonsense variants prone for nonsense mediated decay (NMD) and nonsense variants with experimentally confirmed NMD were identified.21 Deletions of multiple exons, CNVs and translocations were excluded for analysis. A full list of included mutations is available in the online supplementary materials.Supplemental materialThe location of the variant was compared with five known structural domains of the GLI3 gene. (1) repressor domain, (2) zinc finger domain, (3) cleavage site, (4) activator domain, which we defined as a concatenation of the separately identified transactivation zones, the CBP binding domain and the mediator binding domain (MBD) and (5) the MID1 interaction region domain.1 6 22–24 The boundaries of each of the domains were based on available literature (figure 1, exact locations available in the online supplementary materials). The boundaries used by different authors did vary, therefore a consensus was made.In this figure the posterior probability of an anterior phenotype is plotted against the location of the variant, stratified for the type of mutation that was observed. For better overview, only variants with a location effect were displayed.

The full figure, including all variant types, can be found in the online supplementary figure 1. Each mutation is depicted as a dot, the size of the dot represents the number of observations for that variant. If multiple observations were made, the mean posterior odds and IQR are plotted. For the nonsense variants, variants that were predicted to produce nonsense mediated decay, are depicted using a triangle. Again, the size indicates the number of observations." data-icon-position data-hide-link-title="0">Figure 1 In this figure the posterior probability of an anterior phenotype is plotted against the location of the variant, stratified for the type of mutation that was observed.

For better overview, only variants with a location effect were displayed. The full figure, including all variant types, can be found in the online supplementary figure 1. Each mutation is depicted as a dot, the size of the dot represents the number of observations for that variant. If multiple observations were made, the mean posterior odds and IQR are plotted. For the nonsense variants, variants that were predicted to produce nonsense mediated decay, are depicted using a triangle.

Again, the size indicates the number of observations.Supplemental materialLatent class analysisTo cluster phenotypes and relate those to the genotypes of the patients, an explorative analysis was done using LCA in R (R V.3.6.1 for Mac. Polytomous variable LCA, poLCA V.1.4.1.). We used our LCA to detect the number of phenotypic subgroups in the dataset and subsequently predict a class membership for each case in the dataset based on the posterior probabilities.In order to make a reliable prediction, only phenotypes that were sufficiently reported and/or ruled out were feasible for LCA, limiting the analysis to preaxial polydactyly, postaxial polydactyly and syndactyly of the hands and feet. Only full cases were included. To determine the optimal number of classes, we fitted a series of models ranging from a one-class to a six-class model.

The optimal number of classes was based on the conditional Akaike information criterion (cAIC), the non adjusted and the sample-size adjusted Bayesian information criterion (BIC and aBIC) and the obtained entropy.25 The explorative LCA produces both posterior probabilities per case for both classes and predicted class membership. Using the predicted class membership, the phenotypic features per class were determined in a univariate analysis (χ2, SPSS V.25). Using the posterior probabilities on latent class (LC) membership, a scatter plot was created using the location of the variant on the x-axis and the probability of class membership on the y-axis for each of the types of variants (Tibco Spotfire V.7.14). Using these scatter plots, variants that give similar phenotypes were clustered.Genotype/phenotype correlationBecause an LC has no clinical value, the correlation between genotypes and phenotypes was investigated using the predictor phenotypes and the clustered phenotypes. First, those phenotypes that contribute most to LC membership were identified.

Second those phenotypes were directly related to the different types of variants (missense, nonsense, frameshift, splice site) and their clustered locations. Quantification of the relation was performed using a univariate analysis using a χ2 test. Because of our selection criteria, meaning patients at least have two phenotypes, a multivariate using a logistic regression analysis was used to detect the most significant predictors in the overall phenotype (SPSS V.25). Finally, we explored the relation of the clustered genotypes to the presence of corpus callosum agenesis, a rare malformation in GLI3-mediated polydactyly syndromes which cannot be readily diagnosed without additional imaging.ResultsWe included 251 patients from the literature and 46 local patients,10–12 16 21 26–43 in total 297 patients from 155 different families with 127 different GLI3 variants, 32 of which were large deletions, CNVs or translocations. In six local cases, the exact variant could not be retrieved by status research.The distribution of the most frequently observed phenotypes and variants are presented in table 1.

Other recurring phenotypes included developmental delay (n=22), broad nasal root (n=23), frontal bossing or prominent forehead (n=16) and craniosynostosis (n=13), camptodactyly (n=8) and a broad first interdigital webspace of the foot (n=6).View this table:Table 1 Baseline phenotypes and genotypes of selected populationThe LCA model was fitted using the six defined hand/foot phenotypes. Model fit indices for the LCA are displayed in table 2. Based on the BIC, a two-class model has the best fit for our data. The four-class model does show a gain in entropy, however with a higher BIC and loss of df. Therefore, based on the majority of performance statistics and the interpretability of the model, a two-class model was chosen.

Table 3 displays the distribution of phenotypes and genotypes over the two classes.View this table:Table 2 Model fit indices for the one-class through six-class model evaluated in our LCAView this table:Table 3 Distribution of phenotypes and genotypes in the two latent classes (LC)Table 1 depicts the baseline phenotypes and genotypes in the obtained population. Note incomplete data especially in the cranium phenotypes. In total 259 valid genotypes were present. In total, 289 cases had complete data for all hand and foot phenotypes (preaxial polydactyly, postaxial polydactyly and syndactyly) and thus were available for LCA. Combined, for phenotype/genotype correlation 258 cases were available with complete genotypes and complete hand and foot phenotypes.Table 2 depicts the model fit indices for all models that have been fitted to our data.Table 3 depicts the distribution of phenotypes and genotypes over the two assigned LCs.

Hand and foot phenotypes were used as input for the LCA, thus are all complete cases. Malformation of the cranium and genotypes do have missing cases. Note that for the LCA, full case description was required, resulting in eight cases due to incomplete phenotypes. Out of these eight, one also had a genotype that thus needed to be excluded. Missingness of genotypic data was higher in LC2, mostly due to CNVs (table 1).In 54/60 cases, a missense variant produced a posterior phenotype.

Likewise, splice site variants show the same phenotype in 23/24 cases (table 3). For both frameshift and nonsense variants, this relation is not significant (52 anterior vs 54 posterior and 26 anterior vs 42 posterior, respectively). Therefore, only for nonsense and frameshift variants the location of the variant was plotted against the probability for LC2 membership in figure 1. A full scatterplot of all variants is available in online supplementary figure 1.Figure 1 reveals a pattern for these nonsense and frameshift variants that reveals that variants at the C-terminal of the gene predict anterior phenotypes. When relating the domains of the GLI3 protein to the observed phenotype, we observe that the majority of patients with a nonsense or frameshift variant in the repressor domain, the zinc finger domain or the cleavage site had a high probability of an LC2/anterior phenotype.

This group contains all variants that are either experimentally determined to be subject to NMD (triangle marker in figure 1) or predicted to be subject to NMD (diamond marker in figure 1). Frameshift and nonsense variants in the activator domain result in high probability for an LC1/posterior phenotype. These variants will be further referred to as truncating variants in the activator domain.The univariate relation of the individual phenotypes to these two groups of variants are estimated and presented in table 4. In our multivariate analysis, postaxial polydactyly of the foot and hand are the strongest predictors (Beta. 2.548, p<0001 and Beta.

1.47, p=0.013, respectively) for patients to have a truncating variant in the activator domain. Moreover, the effect sizes of preaxial polydactyly of the hand and feet (Beta. ˆ’0.797, p=0123 and −1.772, p=0.001) reveals that especially postaxial polydactyly of the foot is the dominant predictor for the genetic substrate of the observed anomalies.View this table:Table 4 Univariate and multivariate analysis of the phenotype/genotype correlationTable 4 shows exploration of the individual phenotypes on the genotype, both univariate and multivariate. The multivariate analysis corrects for the presence of multiple phenotypes in the underlying population.Although the craniofacial anomalies could not be included in the LCA, the relation between the observed anomalies and the identified genetic substrates can be studied. The prevalence of hypertelorism was equally distributed over the two groups of variants (47/135 vs 21/47 respectively, p<0.229).

However for corpus callosum agenesis and macrocephaly, there was a higher prevalence in patients with a truncating variant in the activator domain (3/75 vs 11/41, p<0.001. OR. 8.8, p<0.001) and 42/123 vs 24/48, p<0.05). Noteworthy is the fact that 11/14 cases with corpus callosum agenesis in the dataset had a truncating variant in the activator domain.DiscussionIn this report, we present new insights into the correlation between the phenotype and the genotype in patients with GLI3-mediated polydactyly syndromes. We illustrate that there are two LCs of patients, best predicted by postaxial polydactyly of the hand and foot for LC1, and the preaxial polydactyly of the hand and foot and syndactyly of the foot for LC2.

Patients with postaxial phenotypes have a higher risk of having a truncating variant in the activator domain of the GLI3 gene which is also related to a higher risk of corpus callosum agenesis. These results suggest a functional difference between truncating variants on the N-terminal and the C-terminal side of the GLI3 cleavage site.Previous attempts of phenotype to genotype correlation have not yet provided the clinical confirmation of these assumed mechanisms in the pathophysiology of GLI3-mediated polydactyly syndromes. Johnston et al have successfully determined the Pallister-Hall region in which truncating variants produce a Pallister-Hall phenotype rather than Greig syndrome.11 However, in their latest population study, subtypes of both syndromes were included to explain the full spectrum of observed malformations. In 2015, Demurger et al reported the higher incidence of corpus callosum agenesis in the Greig syndrome population with truncating mutations in the activator domain.12 Al-Qattan in his review summarises the concept of a spectrum of anomalies dependent on haplo-insufficiency (through different mechanisms) and repressor overexpression.13 However, he bases this theory mainly on reviewed experimental data. Our report is the first to provide an extensive clinical review of cases that substantiate the phenotypic difference between the two groups that could fit the suggested mechanisms.

We agree with Al-Qattan et al that a variation of anomalies can be observed given any pathogenic variant in the GLI3 gene, but overall two dominant phenotypes are present. A population with predominantly preaxial anomalies and one with postaxial anomalies. The presence of preaxial or postaxial polydactyly and syndactyly is not mutually exclusive for one of these two subclasses. Meaning that preaxial polydactyly can co-occur with postaxial polydactyly. However, truncating mutations in the activator domain produce a postaxial phenotype, as can be derived from the risk in table 4.

The higher risk of corpus callosum agenesis in this population shows that differentiating between a preaxial phenotype and a postaxial phenotype, instead of between the different GLI3-mediated polydactyly syndromes, might be more relevant regarding diagnostics for corpus callosum agenesis.We chose to use LCA as an exploratory tool only in our population for two reasons. First of all, LCA can be useful to identify subgroups, but there is no ‘true’ model or number of subgroups you can detect. The best fitting model can only be estimated based on the available measures and approximates the true subgroups that might be present. Second, LC membership assignment is a statistical procedure based on the posterior probability, with concordant errors of the estimation, rather than a clinical value that can be measured or evaluated. Therefore, we decided to use our LCA only in an exploratory tool, and perform our statistics using the actual phenotypes that predict LC membership and the associated genotypes.

Overall, this method worked well to differentiate the two subgroups present in our dataset. However, outliers were observed. A qualitative analysis of these outliers is available in the online supplementary data.The genetic substrate for the two phenotypic clusters can be discussed based on multiple experiments. Overall, we hypothesise two genetic clusters. One that is due to haploinsufficiency and one that is due to abnormal truncation of the activator.

The hypothesised cluster of variants that produce haploinsufficiency is mainly based on the experimental data that confirms NMD in two variants and the NMD prediction of other nonsense variants in Alamut. For the frameshift variants, it is also likely that the cleavage of the zinc finger domain results in functional haploinsufficiency either because of a lack of signalling domains or similarly due to NMD. Missense variants could cause haploinsufficiency through the suggested mechanism by Krauss et al who have illustrated that missense variants in the MID1 domain hamper the functional interaction with the MID1-α4-PP2A complex, leading to a subcellular location of GLI3.24 The observed missense variants in our study exceed the region to which Krauss et al have limited the MID-1 interaction domain. An alternative theory is suggested by Zhou et al who have shown that missense variants in the MBD can cause deficiency in the signalling of GLI3A, functionally implicating a relative overexpression of GLI3R.22 However, GLI3R overexpression would likely produce a posterior phenotype, as determined by Hill et al in their fixed homo and hemizygous GLI3R models.15 Therefore, our hypothesis is that all included missense variants have a similar pathogenesis which is more likely in concordance with the mechanism introduced by Krauss et al. To our knowledge, no splice site variants have been functionally described in literature.

However, it is noted that the 15 and last exon encompasses the entire activator domain, thus any splice site mutation is by definition located on the 5′ side of the activator. Based on the phenotype, we would suggest that these variants fail to produce a functional protein. We hypothesise that the truncating variants of the activator domain lead to overexpression of GLI3R in SHH rich areas. In normal development, the presence of SHH prevents the processing of full length GLI34 into GLI3R, thus producing the full length activator. In patients with a truncating variant of the activator domain of GLI3, thus these variants likely have the largest effect in SHH rich areas, such as the ZPA located at the posterior side of the hand/footplate.

Moreover, the lack of posterior anomalies in the GLI3∆699/- mouse model (hemizygous fixed repressor model) compared with the GLI3∆699/∆699 mouse model (homozygous fixed repressor model), suggesting a dosage effect of GLI3R to be responsible for posterior hand anomalies.15 These findings are supported by Lewandowski et al, who show that the majority of the target genes in GLI signalling are regulated by GLI3R rather than GLI3A.44 Together, these findings suggest a role for the location and type of variant in GLI3-mediated syndromes.Interestingly, the difference between Pallister-Hall syndrome and GLI3-mediated polydactyly syndromes has also been attributed to the GLI3R overexpression. However, the difference in phenotype observed in the cases with a truncating variant in the activator domain and Pallister-Hall syndrome suggest different functional consequences. When studying figure 1, it is noted that the included truncating variants on the 3′ side of the cleavage site seldomly affect the CBP binding region, which could provide an explanation for the observed differences. This binding region is included in the Pallister-Hall region as defined by Johnston et al and is necessary for the downstream signalling with GLI1.10 11 23 45 Interestingly, recent reports show that pathogenic variants in GLI1 can produce phenotypes concordant with Ellis von Krefeld syndrome, which includes overlapping features with Pallister-Hall syndrome.46 The four truncating variants observed in this study that do affect the CBP but did not result in a Pallister-Hall phenotype are conflicting with this theory. Krauss et al postulate an alternative hypothesis, they state that the MID1-α4-PP2A complex, which is essential for GLI3A signalling, could also be the reason for overlapping features of Opitz syndrome, caused by variants in MID1, and Pallister-Hall syndrome.

Further analysis is required to fully appreciate the functional differences between truncating mutations that cause Pallister-Hall syndrome and those that result in GLI3-mediated polydactyly syndromes.For the clinical evaluation of patients with GLI3-mediated polydactyly syndromes, intracranial anomalies are likely the most important to predict based on the variant. Unfortunately, the presence of corpus callosum agenesis was not routinely investigated or reported thus this feature could not be used as an indicator phenotype for LC membership. Interestingly when using only hand and foot phenotypes, we did notice a higher prevalence of corpus callosum agenesis in patients with posterior phenotypes. The suggested relation between truncating mutations in the activator domain causing these posterior phenotypes and corpus callosum agenesis was statistically confirmed (OR. 8.8, p<0.001).

Functionally this relation could be caused by the GLI3-MED12 interaction at the MBD. Pathogenic DNA variants in MED12 can cause Opitz-Kaveggia syndrome, a syndrome in which presentation includes corpus callosum agenesis, broad halluces and thumbs.47In conclusion, there are two distinct phenotypes within the GLI3-mediated polydactyly population. Patients with more posteriorly and more anteriorly oriented hand anomalies. Furthermore, this difference is related to the observed variant in GLI3. We hypothesise that variants that cause haploinsufficiency produce anterior anomalies of the hand, whereas variants with abnormal truncation of the activator domain have more posterior anomalies.

Furthermore, patients that have a variant that produces abnormal truncation of the activator domain, have a greater risk for corpus callosum agenesis. Thus, we advocate to differentiate preaxial or postaxial oriented GLI3 phenotypes to explain the pathophysiology as well as to get a risk assessment for corpus callosum agenesis.Data availability statementData are available upon reasonable request.Ethics statementsPatient consent for publicationNot required.Ethics approvalThe research protocol was approved by the local ethics board of the Erasmus MC University Medical Center (MEC 2015-679)..

AbstractIntroduction can you get seroquel without a prescription cheap generic seroquel. We report a very rare case of familial breast cancer and diffuse gastric cancer, with germline pathogenic variants in both BRCA1 and CDH1 genes. To the cheap generic seroquel best of our knowledge, this is the first report of such an association.Family description. The proband is a woman diagnosed with breast cancer at the age of 52 years.

She requested genetic counselling in 2012, at the age of 91 years, because of a history of breast cancer in her daughter, her sister, her niece and her paternal grandmother and was cheap generic seroquel therefore concerned about her relatives. Her sister and maternal aunt also had gastric cancer. She was tested for several genes associated cheap generic seroquel with hereditary breast cancer.Results. A large deletion of BRCA1 from exons 1 to 7 and two CDH1 pathogenic cis variants were identified.Conclusion.

This complex situation is challenging for cheap generic seroquel genetic counselling and management of at-risk individuals.cancer. Breastcancer. Gastricclinical geneticsgenetic screening/counsellingmolecular geneticsIntroductionGLI-Kruppel family member 3 (GLI3) encodes for a zinc finger transcription factor which plays a key role in the sonic hedgehog (SHH) signalling pathway essential in both limb and craniofacial development.1 2 In hand development, SHH is cheap generic seroquel expressed in the zone of polarising activity (ZPA) on the posterior side of the handplate. The ZPA expresses SHH, creating a gradient of SHH from the posterior to the anterior side of the handplate.

In the presence of SHH, full length GLI3-protein is produced (GLI3A), whereas absence of SHH causes cleavage of GLI3 into its repressor form (GLI3R).3 4 Abnormal expression of this SHH/GLI3R gradient can cause both preaxial and postaxial polydactyly.2Concordantly, pathogenic DNA variants in the GLI3 gene are known to cause multiple syndromes with craniofacial cheap generic seroquel and limb involvement, such as. Acrocallosal syndrome5 (OMIM. 200990), Greig cephalopolysyndactyly syndrome6 (OMIM cheap generic seroquel. 175700) and Pallister-Hall syndrome7 (OMIM.

146510). Also, in non-syndromic polydactyly, such as preaxial polydactyly-type 4 (PPD4, OMIM. 174700),8 pathogenic variants in GLI3 have been described. Out of these diseases, Pallister-Hall syndrome is the most distinct entity, defined by the presence of central polydactyly and hypothalamic hamartoma.9 The other GLI3 syndromes are defined by the presence of preaxial and/or postaxial polydactyly of the hand and feet with or without syndactyly (Greig syndrome, PPD4).

Also, various mild craniofacial features such as hypertelorism and macrocephaly can occur. Pallister-Hall syndrome is caused by truncating variants in the middle third of the GLI3 gene.10–12 The truncation of GLI3 causes an overexpression of GLI3R, which is believed to be the key difference between Pallister-Hall and the GLI3-mediated polydactyly syndromes.9 11 Although multiple attempts have been made, the clinical and genetic distinction between the GLI3-mediated polydactyly syndromes is less evident. This has for example led to the introduction of subGreig and the formulation of an Oro-facial-digital overlap syndrome.10 Other authors, suggested that we should not regard these diseases as separate entities, but as a spectrum of GLI3-mediated polydactyly syndromes.13Although phenotype/genotype correlation of the different syndromes has been cumbersome, clinical and animal studies do provide evidence that distinct regions within the gene, could be related to the individual anomalies contributing to these syndromes. First, case studies show isolated preaxial polydactyly is caused by both truncating and non-truncating variants throughout the GLI3 gene, whereas in isolated postaxial polydactyly cases truncating variants at the C-terminal side of the gene are observed.12 14 These results suggest two different groups of variants for preaxial and postaxial polydactyly.

Second, recent animal studies suggest that posterior malformations in GLI3-mediated polydactyly syndromes are likely related to a dosage effect of GLI3R rather than due to the influence of an altered GLI3A expression.15Past attempts for phenotype/genotype correlation in GLI3-mediated polydactyly syndromes have directly related the diagnosed syndrome to the observed genotype.10–12 16 Focusing on individual hand phenotypes, such as preaxial and postaxial polydactyly and syndactyly might be more reliable because it prevents misclassification due to inconsistent use of syndrome definition. Subsequently, latent class analysis (LCA) provides the possibility to relate a group of observed variables to a set of latent, or unmeasured, parameters and thereby identifying different subgroups in the obtained dataset.17 As a result, LCA allows us to group different phenotypes within the GLI3-mediated polydactyly syndromes and relate the most important predictors of the grouped phenotypes to the observed GLI3 variants.The aim of our study was to further investigate the correlation of the individual phenotypes to the genotypes observed in GLI3-mediated polydactyly syndromes, using LCA. Cases were obtained by both literature review and the inclusion of local clinical cases. Subsequently, we identified two subclasses of limb anomalies that relate to the underlying GLI3 variant.

We provide evidence for two different phenotypic and genotypic groups with predominantly preaxial and postaxial hand and feet anomalies, and we specify those cases with a higher risk for corpus callosum anomalies.MethodsLiterature reviewThe Human Gene Mutation Database (HGMD Professional 2019) was reviewed to identify known pathogenic variants in GLI3 and corresponding phenotypes.18 All references were obtained and cases were included when they were diagnosed with either Greig or subGreig syndrome or PPD4.10–12 Pallister-Hall syndrome and acrocallosal syndrome were excluded because both are regarded distinct syndromes and rather defined by the presence of the non-hand anomalies, than the presence of preaxial or postaxial polydactyly.13 19 Isolated preaxial or postaxial polydactyly were excluded for two reasons. The phenotype/genotype correlations are better understood and both anomalies can occur sporadically which could introduce falsely assumed pathogenic GLI3 variants in the analysis. Additionally, cases were excluded when case-specific phenotypic or genotypic information was not reported or if these two could not be related to each other. Families with a combined phenotypic description, not reducible to individual family members, were included as one case in the analysis.Clinical casesThe Sophia Children’s Hospital Database was reviewed for cases with a GLI3 variant.

Within this population, the same inclusion criteria for the phenotype were valid. Relatives of the index patients were also contacted for participation in this study, when they showed comparable hand, foot, or craniofacial malformations or when a GLI3 variant was identified. Phenotypes of the hand, foot and craniofacial anomalies of the patients treated in the Sophia Children's Hospital were collected using patient documentation. Family members were identified and if possible, clinically verified.

Alternatively, family members were contacted to verify their phenotypes. If no verification was possible, cases were excluded.PhenotypesThe phenotypes of both literature cases and local cases were extracted in a similar fashion. The most frequently reported limb and craniofacial phenotypes were dichotomised. The dichotomised hand and foot phenotypes were preaxial polydactyly, postaxial polydactyly and syndactyly.

Broad halluces or thumbs were commonly reported by authors and were dichotomised as a presentation of preaxial polydactyly. The extracted dichotomised craniofacial phenotypes were hypertelorism, macrocephaly and corpus callosum agenesis. All other phenotypes were registered, but not dichotomised.Pathogenic GLI3 variantsAll GLI3 variants were extracted and checked using Alamut Visual V.2.14. If indicated, variants were renamed according to standard Human Genome Variation Society nomenclature.20 Variants were grouped in either missense, frameshift, nonsense or splice site variants.

In the group of frameshift variants, a subgroup with possible splice site effect were identified for subgroup analysis when indicated. Similarly, nonsense variants prone for nonsense mediated decay (NMD) and nonsense variants with experimentally confirmed NMD were identified.21 Deletions of multiple exons, CNVs and translocations were excluded for analysis. A full list of included mutations is available in the online supplementary materials.Supplemental materialThe location of the variant was compared with five known structural domains of the GLI3 gene. (1) repressor domain, (2) zinc finger domain, (3) cleavage site, (4) activator domain, which we defined as a concatenation of the separately identified transactivation zones, the CBP binding domain and the mediator binding domain (MBD) and (5) the MID1 interaction region domain.1 6 22–24 The boundaries of each of the domains were based on available literature (figure 1, exact locations available in the online supplementary materials).

The boundaries used by different authors did vary, therefore a consensus was made.In this figure the posterior probability of an anterior phenotype is plotted against the location of the variant, stratified for the type of mutation that was observed. For better overview, only variants with a location effect were displayed. The full figure, including all variant types, can be found in the online supplementary figure 1. Each mutation is depicted as a dot, the size of the dot represents the number of observations for that variant.

If multiple observations were made, the mean posterior odds and IQR are plotted. For the nonsense variants, variants that were predicted to produce nonsense mediated decay, are depicted using a triangle. Again, the size indicates the number of observations." data-icon-position data-hide-link-title="0">Figure 1 In this figure the posterior probability of an anterior phenotype is plotted against the location of the variant, stratified for the type of mutation that was observed. For better overview, only variants with a location effect were displayed.

The full figure, including all variant types, can be found in the online supplementary figure 1. Each mutation is depicted as a dot, the size of the dot represents the number of observations for that variant. If multiple observations were made, the mean posterior odds and IQR are plotted. For the nonsense variants, variants that were predicted to produce nonsense mediated decay, are depicted using a triangle.

Again, the size indicates the number of observations.Supplemental materialLatent class analysisTo cluster phenotypes and relate those to the genotypes of the patients, an explorative analysis was done using LCA in R (R V.3.6.1 for Mac. Polytomous variable LCA, poLCA V.1.4.1.). We used our LCA to detect the number of phenotypic subgroups in the dataset and subsequently predict a class membership for each case in the dataset based on the posterior probabilities.In order to make a reliable prediction, only phenotypes that were sufficiently reported and/or ruled out were feasible for LCA, limiting the analysis to preaxial polydactyly, postaxial polydactyly and syndactyly of the hands and feet. Only full cases were included.

To determine the optimal number of classes, we fitted a series of models ranging from a one-class to a six-class model. The optimal number of classes was based on the conditional Akaike information criterion (cAIC), the non adjusted and the sample-size adjusted Bayesian information criterion (BIC and aBIC) and the obtained entropy.25 The explorative LCA produces both posterior probabilities per case for both classes and predicted class membership. Using the predicted class membership, the phenotypic features per class were determined in a univariate analysis (χ2, SPSS V.25). Using the posterior probabilities on latent class (LC) membership, a scatter plot was created using the location of the variant on the x-axis and the probability of class membership on the y-axis for each of the types of variants (Tibco Spotfire V.7.14).

Using these scatter plots, variants that give similar phenotypes were clustered.Genotype/phenotype correlationBecause an LC has no clinical value, the correlation between genotypes and phenotypes was investigated using the predictor phenotypes and the clustered phenotypes. First, those phenotypes that contribute most to LC membership were identified. Second those phenotypes were directly related to the different types of variants (missense, nonsense, frameshift, splice site) and their clustered locations. Quantification of the relation was performed using a univariate analysis using a χ2 test.

Because of our selection criteria, meaning patients at least have two phenotypes, a multivariate using a logistic regression analysis was used to detect the most significant predictors in the overall phenotype (SPSS V.25). Finally, we explored the relation of the clustered genotypes to the presence of corpus callosum agenesis, a rare malformation in GLI3-mediated polydactyly syndromes which cannot be readily diagnosed without additional imaging.ResultsWe included 251 patients from the literature and 46 local patients,10–12 16 21 26–43 in total 297 patients from 155 different families with 127 different GLI3 variants, 32 of which were large deletions, CNVs or translocations. In six local cases, the exact variant could not be retrieved by status research.The distribution of the most frequently observed phenotypes and variants are presented in table 1. Other recurring phenotypes included developmental delay (n=22), broad nasal root (n=23), frontal bossing or prominent forehead (n=16) and craniosynostosis (n=13), camptodactyly (n=8) and a broad first interdigital webspace of the foot (n=6).View this table:Table 1 Baseline phenotypes and genotypes of selected populationThe LCA model was fitted using the six defined hand/foot phenotypes.

Model fit indices for the LCA are displayed in table 2. Based on the BIC, a two-class model has the best fit for our data. The four-class model does show a gain in entropy, however with a higher BIC and loss of df. Therefore, based on the majority of performance statistics and the interpretability of the model, a two-class model was chosen.

Table 3 displays the distribution of phenotypes and genotypes over the two classes.View this table:Table 2 Model fit indices for the one-class through six-class model evaluated in our LCAView this table:Table 3 Distribution of phenotypes and genotypes in the two latent classes (LC)Table 1 depicts the baseline phenotypes and genotypes in the obtained population. Note incomplete data especially in the cranium phenotypes. In total 259 valid genotypes were present. In total, 289 cases had complete data for all hand and foot phenotypes (preaxial polydactyly, postaxial polydactyly and syndactyly) and thus were available for LCA.

Combined, for phenotype/genotype correlation 258 cases were available with complete genotypes and complete hand and foot phenotypes.Table 2 depicts the model fit indices for all models that have been fitted to our data.Table 3 depicts the distribution of phenotypes and genotypes over the two assigned LCs. Hand and foot phenotypes were used as input for the LCA, thus are all complete cases. Malformation of the cranium and genotypes do have missing cases. Note that for the LCA, full case description was required, resulting in eight cases due to incomplete phenotypes.

Out of these eight, one also had a genotype that thus needed to be excluded. Missingness of genotypic data was higher in LC2, mostly due to CNVs (table 1).In 54/60 cases, a missense variant produced a posterior phenotype. Likewise, splice site variants show the same phenotype in 23/24 cases (table 3). For both frameshift and nonsense variants, this relation is not significant (52 anterior vs 54 posterior and 26 anterior vs 42 posterior, respectively).

Therefore, only for nonsense and frameshift variants the location of the variant was plotted against the probability for LC2 membership in figure 1. A full scatterplot of all variants is available in online supplementary figure 1.Figure 1 reveals a pattern for these nonsense and frameshift variants that reveals that variants at the C-terminal of the gene predict anterior phenotypes. When relating the domains of the GLI3 protein to the observed phenotype, we observe that the majority of patients with a nonsense or frameshift variant in the repressor domain, the zinc finger domain or the cleavage site had a high probability of an LC2/anterior phenotype. This group contains all variants that are either experimentally determined to be subject to NMD (triangle marker in figure 1) or predicted to be subject to NMD (diamond marker in figure 1).

Frameshift and nonsense variants in the activator domain result in high probability for an LC1/posterior phenotype. These variants will be further referred to as truncating variants in the activator domain.The univariate relation of the individual phenotypes to these two groups of variants are estimated and presented in table 4. In our multivariate analysis, postaxial polydactyly of the foot and hand are the strongest predictors (Beta. 2.548, p<0001 and Beta.

1.47, p=0.013, respectively) for patients to have a truncating variant in the activator domain. Moreover, the effect sizes of preaxial polydactyly of the hand and feet (Beta. ˆ’0.797, p=0123 and −1.772, p=0.001) reveals that especially postaxial polydactyly of the foot is the dominant predictor for the genetic substrate of the observed anomalies.View this table:Table 4 Univariate and multivariate analysis of the phenotype/genotype correlationTable 4 shows exploration of the individual phenotypes on the genotype, both univariate and multivariate. The multivariate analysis corrects for the presence of multiple phenotypes in the underlying population.Although the craniofacial anomalies could not be included in the LCA, the relation between the observed anomalies and the identified genetic substrates can be studied.

The prevalence of hypertelorism was equally distributed over the two groups of variants (47/135 vs 21/47 respectively, p<0.229). However for corpus callosum agenesis and macrocephaly, there was a higher prevalence in patients with a truncating variant in the activator domain (3/75 vs 11/41, p<0.001. OR. 8.8, p<0.001) and 42/123 vs 24/48, p<0.05).

Noteworthy is the fact that 11/14 cases with corpus callosum agenesis in the dataset had a truncating variant in the activator domain.DiscussionIn this report, we present new insights into the correlation between the phenotype and the genotype in patients with GLI3-mediated polydactyly syndromes. We illustrate that there are two LCs of patients, best predicted by postaxial polydactyly of the hand and foot for LC1, and the preaxial polydactyly of the hand and foot and syndactyly of the foot for LC2. Patients with postaxial phenotypes have a higher risk of having a truncating variant in the activator domain of the GLI3 gene which is also related to a higher risk of corpus callosum agenesis. These results suggest a functional difference between truncating variants on the N-terminal and the C-terminal side of the GLI3 cleavage site.Previous attempts of phenotype to genotype correlation have not yet provided the clinical confirmation of these assumed mechanisms in the pathophysiology of GLI3-mediated polydactyly syndromes.

Johnston et al have successfully determined the Pallister-Hall region in which truncating variants produce a Pallister-Hall phenotype rather than Greig syndrome.11 However, in their latest population study, subtypes of both syndromes were included to explain the full spectrum of observed malformations. In 2015, Demurger et al reported the higher incidence of corpus callosum agenesis in the Greig syndrome population with truncating mutations in the activator domain.12 Al-Qattan in his review summarises the concept of a spectrum of anomalies dependent on haplo-insufficiency (through different mechanisms) and repressor overexpression.13 However, he bases this theory mainly on reviewed experimental data. Our report is the first to provide an extensive clinical review of cases that substantiate the phenotypic difference between the two groups that could fit the suggested mechanisms. We agree with Al-Qattan et al that a variation of anomalies can be observed given any pathogenic variant in the GLI3 gene, but overall two dominant phenotypes are present.

A population with predominantly preaxial anomalies and one with postaxial anomalies. The presence of preaxial or postaxial polydactyly and syndactyly is not mutually exclusive for one of these two subclasses. Meaning that preaxial polydactyly can co-occur with postaxial polydactyly. However, truncating mutations in the activator domain produce a postaxial phenotype, as can be derived from the risk in table 4.

The higher risk of corpus callosum agenesis in this population shows that differentiating between a preaxial phenotype and a postaxial phenotype, instead of between the different GLI3-mediated polydactyly syndromes, might be more relevant regarding diagnostics for corpus callosum agenesis.We chose to use LCA as an exploratory tool only in our population for two reasons. First of all, LCA can be useful to identify subgroups, but there is no ‘true’ model or number of subgroups you can detect. The best fitting model can only be estimated based on the available measures and approximates the true subgroups that might be present. Second, LC membership assignment is a statistical procedure based on the posterior probability, with concordant errors of the estimation, rather than a clinical value that can be measured or evaluated.

Therefore, we decided to use our LCA only in an exploratory tool, and perform our statistics using the actual phenotypes that predict LC membership and the associated genotypes. Overall, this method worked well to differentiate the two subgroups present in our dataset. However, outliers were observed. A qualitative analysis of these outliers is available in the online supplementary data.The genetic substrate for the two phenotypic clusters can be discussed based on multiple experiments.

Overall, we hypothesise two genetic clusters. One that is due to haploinsufficiency and one that is due to abnormal truncation of the activator. The hypothesised cluster of variants that produce haploinsufficiency is mainly based on the experimental data that confirms NMD in two variants and the NMD prediction of other nonsense variants in Alamut. For the frameshift variants, it is also likely that the cleavage of the zinc finger domain results in functional haploinsufficiency either because of a lack of signalling domains or similarly due to NMD.

Missense variants could cause haploinsufficiency through the suggested mechanism by Krauss et al who have illustrated that missense variants in the MID1 domain hamper the functional interaction with the MID1-α4-PP2A complex, leading to a subcellular location of GLI3.24 The observed missense variants in our study exceed the region to which Krauss et al have limited the MID-1 interaction domain. An alternative theory is suggested by Zhou et al who have shown that missense variants in the MBD can cause deficiency in the signalling of GLI3A, functionally implicating a relative overexpression of GLI3R.22 However, GLI3R overexpression would likely produce a posterior phenotype, as determined by Hill et al in their fixed homo and hemizygous GLI3R models.15 Therefore, our hypothesis is that all included missense variants have a similar pathogenesis which is more likely in concordance with the mechanism introduced by Krauss et al. To our knowledge, no splice site variants have been functionally described in literature. However, it is noted that the 15 and last exon encompasses the entire activator domain, thus any splice site mutation is by definition located on the 5′ side of the activator.

Based on the phenotype, we would suggest that these variants fail to produce a functional protein. We hypothesise that the truncating variants of the activator domain lead to overexpression of GLI3R in SHH rich areas. In normal development, the presence of SHH prevents the processing of full length GLI34 into GLI3R, thus producing the full length activator. In patients with a truncating variant of the activator domain of GLI3, thus these variants likely have the largest effect in SHH rich areas, such as the ZPA located at the posterior side of the hand/footplate.

Moreover, the lack of posterior anomalies in the GLI3∆699/- mouse model (hemizygous fixed repressor model) compared with the GLI3∆699/∆699 mouse model (homozygous fixed repressor model), suggesting a dosage effect of GLI3R to be responsible for posterior hand anomalies.15 These findings are supported by Lewandowski et al, who show that the majority of the target genes in GLI signalling are regulated by GLI3R rather than GLI3A.44 Together, these findings suggest a role for the location and type of variant in GLI3-mediated syndromes.Interestingly, the difference between Pallister-Hall syndrome and GLI3-mediated polydactyly syndromes has also been attributed to the GLI3R overexpression. However, the difference in phenotype observed in the cases with a truncating variant in the activator domain and Pallister-Hall syndrome suggest different functional consequences. When studying figure 1, it is noted that the included truncating variants on the 3′ side of the cleavage site seldomly affect the CBP binding region, which could provide an explanation for the observed differences. This binding region is included in the Pallister-Hall region as defined by Johnston et al and is necessary for the downstream signalling with GLI1.10 11 23 45 Interestingly, recent reports show that pathogenic variants in GLI1 can produce phenotypes concordant with Ellis von Krefeld syndrome, which includes overlapping features with Pallister-Hall syndrome.46 The four truncating variants observed in this study that do affect the CBP but did not result in a Pallister-Hall phenotype are conflicting with this theory.

Krauss et al postulate an alternative hypothesis, they state that the MID1-α4-PP2A complex, which is essential for GLI3A signalling, could also be the reason for overlapping features of Opitz syndrome, caused by variants in MID1, and Pallister-Hall syndrome. Further analysis is required to fully appreciate the functional differences between truncating mutations that cause Pallister-Hall syndrome and those that result in GLI3-mediated polydactyly syndromes.For the clinical evaluation of patients with GLI3-mediated polydactyly syndromes, intracranial anomalies are likely the most important to predict based on the variant. Unfortunately, the presence of corpus callosum agenesis was not routinely investigated or reported thus this feature could not be used as an indicator phenotype for LC membership. Interestingly when using only hand and foot phenotypes, we did notice a higher prevalence of corpus callosum agenesis in patients with posterior phenotypes.

The suggested relation between truncating mutations in the activator domain causing these posterior phenotypes and corpus callosum agenesis was statistically confirmed (OR. 8.8, p<0.001). Functionally this relation could be caused by the GLI3-MED12 interaction at the MBD. Pathogenic DNA variants in MED12 can cause Opitz-Kaveggia syndrome, a syndrome in which presentation includes corpus callosum agenesis, broad halluces and thumbs.47In conclusion, there are two distinct phenotypes within the GLI3-mediated polydactyly population.

Patients with more posteriorly and more anteriorly oriented hand anomalies. Furthermore, this difference is related to the observed variant in GLI3. We hypothesise that variants that cause haploinsufficiency produce anterior anomalies of the hand, whereas variants with abnormal truncation of the activator domain have more posterior anomalies. Furthermore, patients that have a variant that produces abnormal truncation of the activator domain, have a greater risk for corpus callosum agenesis.

Thus, we advocate to differentiate preaxial or postaxial oriented GLI3 phenotypes to explain the pathophysiology as well as to get a risk assessment for corpus callosum agenesis.Data availability statementData are available upon reasonable request.Ethics statementsPatient consent for publicationNot required.Ethics approvalThe research protocol was approved by the local ethics board of the Erasmus MC University Medical Center (MEC 2015-679)..

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